Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | A6122_RS11230 | Not Available | Negative | 2476381 - 2476989 | 22144.6 |
| response regulator transcription factor | A6122_RS11235 | Not Available | Negative | 2477045 - 2477746 | 25461.4 |
| rv2578c family radical sam protein | A6122_RS11240 | Not Available | Negative | 2477784 - 2478911 | 41502.8 |
| malate:quinone oxidoreductase | A6122_RS11245 | Not Available | Negative | 2478951 - 2480498 | 55507.4 |
| aspartate-semialdehyde dehydrogenase | A6122_RS11250 | Not Available | Negative | 2480560 - 2481618 | 36927.1 |
| aspartate kinase | A6122_RS11255 | Not Available | Negative | 2481735 - 2483018 | 44904.6 |
| recombination mediator recr | A6122_RS11260 | Not Available | Negative | 2483122 - 2483721 | 22062.7 |
| dna polymerase iii subunit gamma and tau | A6122_RS11265 | Not Available | Negative | 2483783 - 2485999 | 78125.1 |
| molybdenum cofactor guanylyltransferase | A6122_RS11270 | Not Available | Positive | 2486073 - 2486693 | 20875.1 |
| duf6457 domain-containing protein | A6122_RS17350 | Not Available | Positive | 2486698 - 2487030 | 10990.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
