Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS17345 | Not Available | Positive | 2466601 - 2466993 | 13639.4 |
| hypothetical protein | A6122_RS11185 | Not Available | Positive | 2467109 - 2467915 | 27577.9 |
| metallophosphoesterase | A6122_RS11190 | Not Available | Positive | 2467993 - 2469006 | 35156.8 |
| Trna-pro | Not Available | Not Available | Positive | 2469083 - 2469156 | Not Available |
| vanz family protein | A6122_RS11200 | Not Available | Positive | 2469397 - 2469912 | 18478.9 |
| udp-glucose/gdp-mannose dehydrogenase family protein | A6122_RS11205 | Not Available | Negative | 2469938 - 2471242 | 45206.8 |
| hypothetical protein | A6122_RS11210 | Not Available | Negative | 2471341 - 2472012 | 23600.3 |
| polysaccharide biosynthesis tyrosine autokinase | A6122_RS11215 | Not Available | Negative | 2472023 - 2473489 | 51334.8 |
| hypothetical protein | A6122_RS11220 | Not Available | Negative | 2473591 - 2474598 | 35002.3 |
| sugar transferase | A6122_RS11225 | Not Available | Negative | 2474772 - 2476256 | 54876.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
