Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i dna topoisomerase | A6122_RS11135 | Not Available | Negative | 2456624 - 2459533 | 105044.0 |
| hypothetical protein | A6122_RS11140 | Not Available | Positive | 2459815 - 2460063 | 8692.09 |
| rv3654c family tade-like protein | A6122_RS11145 | Not Available | Negative | 2460089 - 2460451 | 11374.6 |
| tade family type iv pilus minor pilin | A6122_RS11150 | Not Available | Negative | 2460451 - 2460801 | 11466.0 |
| duf4244 domain-containing protein | A6122_RS17340 | Not Available | Negative | 2460798 - 2461163 | 12096.3 |
| type ii secretion system f family protein | A6122_RS11160 | Not Available | Negative | 2461300 - 2462298 | 33334.9 |
| tada family conjugal transfer-associated atpase | A6122_RS11165 | Not Available | Negative | 2462295 - 2463311 | 35377.6 |
| acetate--coa ligase | A6122_RS11170 | Not Available | Positive | 2463788 - 2465782 | 71909.1 |
| rida family protein | A6122_RS11175 | Not Available | Negative | 2465850 - 2466305 | 15067.2 |
| hypothetical protein | A6122_RS16990 | Not Available | Negative | 2466302 - 2466472 | 6126.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
