Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase c-terminal domain-containing protein | A6122_RS01060 | Not Available | Negative | 239374 - 241398 | 70999.6 |
| adenylosuccinate synthase | A6122_RS01065 | Not Available | Positive | 241621 - 242904 | 46613.6 |
| endonuclease domain-containing protein | A6122_RS01070 | Not Available | Negative | 242923 - 243744 | 29869.9 |
| hypothetical protein | A6122_RS01075 | Not Available | Positive | 243982 - 244584 | 20271.8 |
| abc transporter atp-binding protein | A6122_RS01080 | Not Available | Positive | 244686 - 245438 | 27105.5 |
| ftsx-like permease family protein | A6122_RS01085 | Not Available | Positive | 245435 - 246838 | 46544.6 |
| hypothetical protein | A6122_RS17065 | Not Available | Positive | 247058 - 247240 | 6697.93 |
| atp-dependent dna ligase | A6122_RS01095 | Not Available | Positive | 247307 - 247636 | 12434.7 |
| hypothetical protein | A6122_RS01100 | Not Available | Positive | 247633 - 247839 | 7342.61 |
| adp/atp-dependent (s)-nad(p)h-hydrate dehydratase | A6122_RS01105 | Not Available | Negative | 247858 - 248709 | 28582.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
