Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | A6122_RS10935 | Not Available | Positive | 2415703 - 2416521 | 30072.6 |
| m28 family peptidase | A6122_RS10940 | Not Available | Positive | 2416927 - 2418678 | 58710.0 |
| chloramphenicol phosphotransferase cpt family protein | A6122_RS10945 | Not Available | Positive | 2418800 - 2419378 | 21066.9 |
| hypothetical protein | A6122_RS17330 | Not Available | Negative | 2419383 - 2419637 | 9153.91 |
| glutamate-cysteine ligase family protein | A6122_RS17335 | Not Available | Negative | 2419746 - 2420069 | 11992.2 |
| is256 family transposase | A6122_RS10960 | Not Available | Positive | 2420114 - 2421475 | 50192.2 |
| glutamate-cysteine ligase family protein | A6122_RS10965 | Not Available | Negative | 2421504 - 2422052 | 19692.7 |
| ku protein | A6122_RS10970 | Not Available | Positive | 2422329 - 2423300 | 35588.0 |
| hypothetical protein | A6122_RS10975 | Not Available | Negative | 2423335 - 2423829 | 18086.0 |
| hypothetical protein | A6122_RS10980 | Not Available | Positive | 2423935 - 2424336 | 13501.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
