Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 2408344 - 2408418 | Not Available |
| gntr family transcriptional regulator | A6122_RS10895 | Not Available | Positive | 2408594 - 2408950 | 12897.5 |
| abc transporter atp-binding protein | A6122_RS10900 | Not Available | Positive | 2408947 - 2409822 | 32259.5 |
| transposase family protein | A6122_RS15925 | Not Available | Negative | 2409960 - 2410781 | 29415.8 |
| is3 family transposase | A6122_RS15930 | Not Available | Negative | 2410887 - 2411174 | 10710.8 |
| transposase | A6122_RS15935 | Not Available | Negative | 2411322 - 2411612 | 11123.2 |
| is256 family transposase | A6122_RS10910 | Not Available | Negative | 2411631 - 2412968 | 49050.7 |
| glutamate-cysteine ligase family protein | A6122_RS16625 | Not Available | Positive | 2413018 - 2413772 | 27165.2 |
| mfs transporter | A6122_RS10925 | Not Available | Positive | 2413862 - 2415067 | 41418.8 |
| hypothetical protein | A6122_RS10930 | Not Available | Positive | 2415138 - 2415680 | 20028.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
