Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS10840 | Not Available | Positive | 2398792 - 2399004 | 7808.2 |
| type iv secretory system conjugative dna transfer family protein | A6122_RS10845 | Not Available | Positive | 2398997 - 2401153 | 77901.5 |
| replication-relaxation family protein | A6122_RS10850 | Not Available | Positive | 2401314 - 2402252 | 35503.2 |
| transposase family protein | A6122_RS15915 | Not Available | Negative | 2402162 - 2402917 | 28640.2 |
| is3 family transposase | A6122_RS10860 | Not Available | Positive | 2403190 - 2404373 | 45213.6 |
| hypothetical protein | A6122_RS16615 | Not Available | Positive | 2404312 - 2404644 | 12712.9 |
| hypothetical protein | A6122_RS10865 | Not Available | Positive | 2404692 - 2405033 | 13170.0 |
| transposase family protein | A6122_RS10870 | Not Available | Positive | 2405158 - 2405913 | 28640.2 |
| hypothetical protein | A6122_RS10875 | Not Available | Positive | 2406091 - 2406456 | 14299.5 |
| hypothetical protein | A6122_RS17325 | Not Available | Negative | 2407530 - 2408231 | 25285.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
