Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | A6122_RS15910 | Not Available | Positive | 2390784 - 2391554 | 28587.5 |
| site-specific integrase | A6122_RS10795 | Not Available | Negative | 2391878 - 2392198 | 12727.4 |
| hypothetical protein | A6122_RS10800 | Not Available | Positive | 2392590 - 2393240 | 22106.4 |
| hypothetical protein | A6122_RS10805 | Not Available | Positive | 2393237 - 2394319 | 37965.9 |
| hypothetical protein | A6122_RS10810 | Not Available | Positive | 2394475 - 2395017 | 18894.7 |
| mt-a70 family methyltransferase | A6122_RS10815 | Not Available | Positive | 2395270 - 2395866 | 22402.8 |
| transposase family protein | A6122_RS10820 | Not Available | Negative | 2396170 - 2396925 | 28640.2 |
| transposase family protein | A6122_RS10825 | Not Available | Positive | 2397077 - 2397700 | 23194.5 |
| transposase family protein | A6122_RS10830 | Not Available | Positive | 2397791 - 2398546 | 28640.2 |
| hypothetical protein | A6122_RS10835 | Not Available | Positive | 2398555 - 2398746 | 7049.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
