Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | A6122_RS10765 | Not Available | Negative | 2381510 - 2382265 | 28640.2 |
| hypothetical protein | A6122_RS16605 | Not Available | Negative | 2382413 - 2382586 | 5783.82 |
| lsr2 family protein | A6122_RS10770 | Not Available | Negative | 2383460 - 2383795 | 12040.0 |
| histone-like nucleoid-structuring protein lsr2 | A6122_RS10775 | Not Available | Negative | 2383922 - 2384137 | 7984.55 |
| hypothetical protein | A6122_RS10780 | Not Available | Negative | 2385047 - 2385346 | 10768.3 |
| helix-turn-helix domain-containing protein | A6122_RS10785 | Not Available | Negative | 2385500 - 2385718 | 8141.75 |
| hypothetical protein | A6122_RS10790 | Not Available | Negative | 2385865 - 2387004 | 41777.8 |
| transposase family protein | A6122_RS15900 | Not Available | Positive | 2387327 - 2388097 | 28599.5 |
| transposase family protein | A6122_RS15905 | Not Available | Positive | 2388940 - 2389710 | 28599.5 |
| hypothetical protein | A6122_RS16610 | Not Available | Negative | 2390065 - 2390520 | 16833.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
