Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pitrilysin family protein | A6122_RS15870 | Not Available | Negative | 2369801 - 2370958 | 41721.1 |
| insulinase family protein | A6122_RS16600 | Not Available | Negative | 2370942 - 2371781 | 30188.7 |
| transposase family protein | A6122_RS10740 | Not Available | Positive | 2372030 - 2372785 | 28640.2 |
| gnat family n-acetyltransferase | A6122_RS10745 | Not Available | Negative | 2373113 - 2373658 | 20340.1 |
| s9 family peptidase | A6122_RS15885 | Not Available | Negative | 2374497 - 2376302 | 64420.4 |
| tfua-like protein | A6122_RS15890 | Not Available | Negative | 2376365 - 2377561 | 44221.2 |
| ycao-like family protein | A6122_RS15895 | Not Available | Negative | 2377607 - 2378710 | 39838.6 |
| jmjc domain-containing protein | A6122_RS10750 | Not Available | Negative | 2378738 - 2379643 | 33158.2 |
| jmjc domain-containing protein | A6122_RS10755 | Not Available | Negative | 2379646 - 2380569 | 34205.3 |
| transposase family protein | A6122_RS10760 | Not Available | Negative | 2380508 - 2381263 | 28640.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
