Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS16585 | Not Available | Positive | 2358343 - 2358948 | 22001.1 |
| transposase family protein | A6122_RS15850 | Not Available | Positive | 2358906 - 2359676 | 28629.6 |
| hypothetical protein | A6122_RS10720 | Not Available | Positive | 2359938 - 2360687 | 27723.9 |
| dna adenine methylase | A6122_RS17315 | Not Available | Positive | 2361315 - 2361851 | 19630.2 |
| hypothetical protein | A6122_RS16590 | Not Available | Positive | 2362761 - 2363258 | 18069.3 |
| hypothetical protein | A6122_RS16595 | Not Available | Positive | 2363927 - 2364331 | 14924.2 |
| lsr2 family protein | A6122_RS17575 | Not Available | Negative | 2364614 - 2365324 | 25563.3 |
| mfs transporter | A6122_RS10725 | Not Available | Negative | 2366061 - 2367320 | 42521.8 |
| molybdopterin-synthase adenylyltransferase moeb | A6122_RS10730 | Not Available | Negative | 2367630 - 2368838 | 42584.0 |
| transposase family protein | A6122_RS10735 | Not Available | Positive | 2369074 - 2369829 | 28640.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
