Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | A6122_RS10675 | Not Available | Positive | 2347818 - 2348573 | 28640.2 |
| is3 family transposase | A6122_RS17310 | Not Available | Negative | 2348577 - 2349359 | 29732.4 |
| transposase | A6122_RS15835 | Not Available | Negative | 2349329 - 2349619 | 11009.0 |
| pr6pr family membrane protein | A6122_RS10690 | Not Available | Negative | 2350024 - 2350644 | 21675.8 |
| hypothetical protein | A6122_RS10695 | Not Available | Positive | 2351590 - 2352237 | 23648.1 |
| hypothetical protein | A6122_RS16580 | Not Available | Positive | 2352644 - 2353102 | 16344.3 |
| duf4365 domain-containing protein | A6122_RS15840 | Not Available | Negative | 2353210 - 2354313 | 41035.1 |
| is3 family transposase | A6122_RS10705 | Not Available | Negative | 2354794 - 2355977 | 45155.5 |
| dgqhr domain-containing protein | A6122_RS15845 | Not Available | Positive | 2356038 - 2357306 | 47384.8 |
| transposase family protein | A6122_RS10715 | Not Available | Positive | 2357387 - 2358142 | 28640.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
