Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS01025 | Not Available | Positive | 233265 - 233813 | 19925.3 |
| hypothetical protein | A6122_RS01030 | Not Available | Positive | 233887 - 234342 | 16848.3 |
| transposase family protein | A6122_RS01035 | Not Available | Negative | 234716 - 235486 | 28130.9 |
| hypothetical protein | A6122_RS16260 | Not Available | Positive | 235633 - 236169 | 19484.7 |
| glutamate-cysteine ligase family protein | A6122_RS15410 | Not Available | Negative | 236313 - 236657 | 12058.3 |
| nuclear transport factor 2 family protein | A6122_RS01040 | Not Available | Negative | 236730 - 237131 | 14777.5 |
| sdr family oxidoreductase | A6122_RS15415 | Not Available | Negative | 237137 - 237457 | 11036.1 |
| mmcq/yjbr family dna-binding protein | A6122_RS01045 | Not Available | Positive | 237571 - 237954 | 13395.2 |
| had-iib family hydrolase | A6122_RS01050 | Not Available | Negative | 238003 - 238755 | 27634.7 |
| hypothetical protein | A6122_RS01055 | Not Available | Positive | 238861 - 239313 | 16008.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
