Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4287 domain-containing protein | A6122_RS10615 | Not Available | Positive | 2341389 - 2341634 | 8943.59 |
| marr family winged helix-turn-helix transcriptional regulator | A6122_RS10620 | Not Available | Positive | 2341774 - 2342271 | 18168.8 |
| hypothetical protein | A6122_RS10625 | Not Available | Positive | 2342398 - 2342619 | 7755.32 |
| gdsl-type esterase/lipase family protein | A6122_RS10635 | Not Available | Positive | 2342963 - 2343862 | 30298.5 |
| pld nuclease n-terminal domain-containing protein | A6122_RS10640 | Not Available | Negative | 2343882 - 2344259 | 14234.6 |
| hypothetical protein | A6122_RS10650 | Not Available | Positive | 2344632 - 2345045 | 14293.4 |
| hypothetical protein | A6122_RS10655 | Not Available | Negative | 2345042 - 2345842 | 27067.5 |
| hypothetical protein | A6122_RS10665 | Not Available | Positive | 2346617 - 2346853 | 7763.55 |
| hypothetical protein | A6122_RS15825 | Not Available | Negative | 2346862 - 2347059 | 7714.16 |
| transposase family protein | A6122_RS10670 | Not Available | Positive | 2347156 - 2347737 | 21399.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
