Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sida/iucd/pvda family monooxygenase | A6122_RS10465 | Not Available | Negative | 2312868 - 2314217 | 50212.4 |
| mfs transporter | A6122_RS10470 | Not Available | Negative | 2314314 - 2315579 | 44406.1 |
| histone-like nucleoid-structuring protein lsr2 | A6122_RS10475 | Not Available | Negative | 2316257 - 2316472 | 7991.55 |
| Trna-ala | Not Available | Not Available | Positive | 2316770 - 2316845 | Not Available |
| hypothetical protein | A6122_RS10485 | Not Available | Negative | 2316920 - 2317882 | 34338.2 |
| gnat family n-acetyltransferase | A6122_RS10490 | Not Available | Negative | 2317922 - 2318647 | 26586.7 |
| utp--glucose-1-phosphate uridylyltransferase galu | A6122_RS10495 | Not Available | Negative | 2318790 - 2319680 | 32285.7 |
| 5-formyltetrahydrofolate cyclo-ligase | A6122_RS10500 | Not Available | Positive | 2319836 - 2320420 | 21278.3 |
| glutamate-cysteine ligase family protein | A6122_RS17565 | Not Available | Positive | 2320463 - 2320603 | 5184.07 |
| hypothetical protein | A6122_RS17570 | Not Available | Negative | 2320618 - 2320857 | 8710.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
