Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | A6122_RS10415 | Not Available | Negative | 2303767 - 2304840 | 35917.1 |
| abc transporter atp-binding protein | A6122_RS10420 | Not Available | Negative | 2304837 - 2305502 | 23026.8 |
| hypothetical protein | A6122_RS10425 | Not Available | Negative | 2305550 - 2306656 | 37238.9 |
| hypothetical protein | A6122_RS10430 | Not Available | Negative | 2306659 - 2307270 | 21129.4 |
| hypothetical protein | A6122_RS10435 | Not Available | Negative | 2307267 - 2307632 | 12600.5 |
| pyridoxamine 5'-phosphate oxidase family protein | A6122_RS10440 | Not Available | Positive | 2307835 - 2308221 | 13850.6 |
| hypothetical protein | A6122_RS10445 | Not Available | Positive | 2308226 - 2309122 | 31158.7 |
| sgnh/gdsl hydrolase family protein | A6122_RS10450 | Not Available | Negative | 2309170 - 2310375 | 40387.3 |
| ketoacyl-acp synthase iii family protein | A6122_RS10455 | Not Available | Negative | 2310530 - 2311582 | 38082.0 |
| plp-dependent aspartate aminotransferase family protein | A6122_RS10460 | Not Available | Negative | 2311579 - 2312859 | 45154.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
