Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 68 protein | A6122_RS10365 | Not Available | Positive | 2291519 - 2293243 | 63309.4 |
| methyltransferase | A6122_RS10370 | Not Available | Negative | 2293662 - 2295323 | 59217.2 |
| nitroreductase family deazaflavin-dependent oxidoreductase | A6122_RS10375 | Not Available | Positive | 2295322 - 2295759 | 16360.2 |
| triacylglycerol lipase | A6122_RS10380 | Not Available | Negative | 2295873 - 2296565 | 25830.3 |
| coa ester lyase | A6122_RS10385 | Not Available | Negative | 2296695 - 2297558 | 30919.6 |
| glycosyltransferase family 39 protein | A6122_RS10390 | Not Available | Negative | 2297707 - 2299113 | 48312.4 |
| mycothiol transferase | A6122_RS10395 | Not Available | Negative | 2299135 - 2299653 | 18499.4 |
| long-chain-fatty-acid--coa ligase | A6122_RS10400 | Not Available | Positive | 2299744 - 2301444 | 60834.4 |
| nadp-dependent oxidoreductase | A6122_RS10405 | Not Available | Positive | 2301505 - 2302449 | 31995.3 |
| acetyl-coa c-acyltransferase | A6122_RS10410 | Not Available | Positive | 2302567 - 2303757 | 39921.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
