Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease domain-containing protein | A6122_RS10265 | Not Available | Positive | 2269189 - 2269998 | 29557.4 |
| yihy/virulence factor brkb family protein | A6122_RS10270 | Not Available | Positive | 2270131 - 2271213 | 38438.4 |
| deor/glpr family dna-binding transcription regulator | A6122_RS10275 | Not Available | Positive | 2271393 - 2272154 | 26725.2 |
| 1-phosphofructokinase family hexose kinase | A6122_RS10280 | Not Available | Positive | 2272151 - 2273110 | 32362.2 |
| pts sugar transporter subunit iia | A6122_RS10285 | Not Available | Positive | 2273107 - 2273559 | 15324.3 |
| pts fructose-like transporter subunit iib | A6122_RS10290 | Not Available | Positive | 2273556 - 2275373 | 61803.1 |
| exodeoxyribonuclease iii | A6122_RS10295 | Not Available | Positive | 2275956 - 2276792 | 30718.8 |
| tryptophan--trna ligase | A6122_RS10300 | Not Available | Positive | 2276866 - 2277891 | 37355.4 |
| had family hydrolase | A6122_RS10305 | Not Available | Positive | 2277899 - 2278630 | 25978.7 |
| glycerol kinase glpk | A6122_RS10310 | Not Available | Negative | 2278979 - 2280493 | 54946.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
