Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | A6122_RS10215 | Not Available | Negative | 2257333 - 2258598 | 43729.5 |
| abc transporter permease | A6122_RS10220 | Not Available | Negative | 2258595 - 2259905 | 45242.4 |
| abc transporter atp-binding protein | A6122_RS10225 | Not Available | Negative | 2259902 - 2261422 | 54662.0 |
| bmp family protein | A6122_RS10230 | Not Available | Negative | 2261569 - 2262654 | 36565.3 |
| mannose-1-phosphate guanylyltransferase | A6122_RS10235 | Not Available | Negative | 2262944 - 2264077 | 39777.3 |
| glycosyltransferase family 1 protein | A6122_RS10240 | Not Available | Positive | 2264166 - 2265290 | 39484.4 |
| succinate dehydrogenase, cytochrome b556 subunit | A6122_RS10245 | Not Available | Positive | 2265427 - 2265861 | 16051.9 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | A6122_RS10250 | Not Available | Positive | 2265858 - 2266301 | 15891.6 |
| succinate dehydrogenase flavoprotein subunit | A6122_RS10255 | Not Available | Positive | 2266477 - 2268240 | 64408.5 |
| succinate dehydrogenase iron-sulfur subunit | A6122_RS10260 | Not Available | Positive | 2268243 - 2269004 | 28282.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
