Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphatase | A6122_RS10165 | Not Available | Positive | 2246894 - 2247520 | 21899.9 |
| biotin carboxylase n-terminal domain-containing protein | A6122_RS10170 | Not Available | Positive | 2247619 - 2249385 | 61834.2 |
| nad(p)h-quinone dehydrogenase | A6122_RS10175 | Not Available | Negative | 2249403 - 2250839 | 49954.9 |
| purine-nucleoside phosphorylase | A6122_RS10180 | Not Available | Positive | 2250945 - 2251778 | 28962.5 |
| phospho-sugar mutase | A6122_RS10185 | Not Available | Positive | 2251775 - 2253442 | 58008.7 |
| pts sugar transporter subunit iib | A6122_RS10190 | Not Available | Negative | 2253476 - 2253748 | 9480.47 |
| pts sugar transporter subunit iia | A6122_RS10195 | Not Available | Negative | 2253745 - 2254230 | 16705.8 |
| adenosine deaminase | A6122_RS10200 | Not Available | Negative | 2254233 - 2255354 | 40520.6 |
| thymidine phosphorylase | A6122_RS10205 | Not Available | Negative | 2255573 - 2256880 | 45852.9 |
| cytidine deaminase | A6122_RS10210 | Not Available | Negative | 2256917 - 2257321 | 14085.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
