Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS00980 | Not Available | Negative | 225209 - 225640 | 15215.8 |
| hypothetical protein | A6122_RS16255 | Not Available | Negative | 225712 - 225873 | 5534.41 |
| tetratricopeptide repeat protein | A6122_RS00985 | Not Available | Positive | 226164 - 226670 | 18506.8 |
| hypothetical protein | A6122_RS00990 | Not Available | Positive | 226962 - 227201 | 8736.1 |
| hypothetical protein | A6122_RS15405 | Not Available | Positive | 227556 - 228221 | 24380.2 |
| dmt family transporter | A6122_RS00995 | Not Available | Negative | 228387 - 229337 | 33411.6 |
| helix-turn-helix domain-containing protein | A6122_RS01000 | Not Available | Positive | 229369 - 229923 | 19759.4 |
| hypothetical protein | A6122_RS01010 | Not Available | Positive | 230615 - 230836 | 7793.09 |
| hypothetical protein | A6122_RS01015 | Not Available | Positive | 230988 - 231896 | 33663.5 |
| potassium channel family protein | A6122_RS01020 | Not Available | Positive | 232119 - 232913 | 29318.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
