Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | A6122_RS10115 | Not Available | Negative | 2235000 - 2236130 | 39997.7 |
| ph domain-containing protein | A6122_RS10120 | Not Available | Negative | 2236194 - 2236685 | 17767.7 |
| biotin--[acetyl-coa-carboxylase] ligase | A6122_RS10125 | Not Available | Negative | 2236685 - 2237452 | 25933.9 |
| acyl-coa carboxylase subunit beta | A6122_RS10130 | Not Available | Positive | 2237647 - 2239251 | 57303.7 |
| bifunctional lysylphosphatidylglycerol flippase/synthetase mprf | A6122_RS10135 | Not Available | Negative | 2239331 - 2241901 | 91712.1 |
| acyl-coa carboxylase epsilon subunit | A6122_RS10140 | Not Available | Positive | 2242012 - 2242233 | 7364.6 |
| hypothetical protein | A6122_RS10145 | Not Available | Negative | 2242573 - 2243616 | 36672.2 |
| sensor histidine kinase | A6122_RS10150 | Not Available | Negative | 2243613 - 2244827 | 42724.9 |
| response regulator transcription factor | A6122_RS10155 | Not Available | Negative | 2244814 - 2245512 | 24599.3 |
| class i sam-dependent rna methyltransferase | A6122_RS10160 | Not Available | Negative | 2245545 - 2246849 | 46506.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
