Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtra family protein | A6122_RS10070 | Not Available | Positive | 2225934 - 2226446 | 18763.1 |
| hypothetical protein | A6122_RS17305 | Not Available | Negative | 2226435 - 2226572 | 4657.59 |
| glycosyltransferase family 2 protein | A6122_RS10075 | Not Available | Positive | 2226559 - 2227407 | 30969.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase family protein | A6122_RS10080 | Not Available | Negative | 2227425 - 2228033 | 22524.5 |
| dtdp-4-dehydrorhamnose reductase | A6122_RS10085 | Not Available | Positive | 2228131 - 2228976 | 29912.0 |
| glycosyltransferase family 1 protein | A6122_RS10090 | Not Available | Positive | 2228973 - 2230109 | 40394.5 |
| hypothetical protein | A6122_RS10095 | Not Available | Negative | 2230158 - 2230799 | 23254.8 |
| alpha/beta hydrolase | A6122_RS10100 | Not Available | Negative | 2230792 - 2232852 | 72556.9 |
| lcp family protein | A6122_RS10105 | Not Available | Negative | 2233059 - 2234423 | 49246.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | A6122_RS10110 | Not Available | Negative | 2234420 - 2234887 | 15728.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
