Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | A6122_RS10020 | Not Available | Negative | 2215011 - 2216564 | 56936.4 |
| hypothetical protein | A6122_RS10025 | Not Available | Negative | 2216561 - 2216836 | 10487.7 |
| abc transporter permease | A6122_RS10030 | Not Available | Positive | 2217199 - 2218155 | 34511.8 |
| abc transporter atp-binding protein | A6122_RS10035 | Not Available | Positive | 2218158 - 2219411 | 45328.1 |
| glycosyltransferase family 1 protein | A6122_RS10040 | Not Available | Positive | 2219408 - 2220556 | 41462.1 |
| gtra family protein | A6122_RS10045 | Not Available | Negative | 2220588 - 2221193 | 21691.5 |
| glycosyltransferase family 2 protein | A6122_RS10050 | Not Available | Negative | 2221198 - 2221923 | 27091.5 |
| nad-dependent epimerase/dehydratase family protein | A6122_RS10055 | Not Available | Negative | 2221920 - 2222876 | 34481.6 |
| hypothetical protein | A6122_RS10060 | Not Available | Positive | 2223004 - 2224863 | 66822.3 |
| polyprenol monophosphomannose synthase | A6122_RS10065 | Not Available | Negative | 2224929 - 2225678 | 27330.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
