Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4129 domain-containing protein | A6122_RS09920 | Not Available | Positive | 2191857 - 2192501 | 22661.1 |
| duf4350 domain-containing protein | A6122_RS09925 | Not Available | Positive | 2192498 - 2193697 | 41086.4 |
| moxr family atpase | A6122_RS09930 | Not Available | Positive | 2193694 - 2194689 | 35299.4 |
| duf58 domain-containing protein | A6122_RS09935 | Not Available | Positive | 2194694 - 2196001 | 46969.3 |
| stage ii sporulation protein m | A6122_RS09940 | Not Available | Negative | 2196026 - 2197021 | 35260.5 |
| rdd family protein | A6122_RS09945 | Not Available | Positive | 2197077 - 2197916 | 29307.8 |
| duf3499 family protein | A6122_RS09950 | Not Available | Negative | 2197935 - 2198141 | 7550.96 |
| metallopeptidase family protein | A6122_RS09955 | Not Available | Positive | 2198172 - 2198630 | 17282.6 |
| duf5719 family protein | A6122_RS09960 | Not Available | Negative | 2198701 - 2200203 | 48716.2 |
| glycosyltransferase family 2 protein | A6122_RS09965 | Not Available | Negative | 2200196 - 2203063 | 98481.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
