Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| whib family transcriptional regulator | A6122_RS09870 | Not Available | Positive | 2178906 - 2179154 | 8987.61 |
| sensor histidine kinase | A6122_RS09875 | Not Available | Negative | 2179232 - 2180731 | 54376.5 |
| rv3235 family protein | A6122_RS09880 | Not Available | Positive | 2180955 - 2181410 | 16878.4 |
| preprotein translocase subunit seca | A6122_RS09885 | Not Available | Negative | 2181797 - 2184598 | 103608.0 |
| ribosome hibernation-promoting factor, hpf/yfia family | A6122_RS09890 | Not Available | Negative | 2184795 - 2185478 | 24724.0 |
| comf family protein | A6122_RS09895 | Not Available | Negative | 2185530 - 2186252 | 24292.6 |
| germn domain-containing protein | A6122_RS09900 | Not Available | Negative | 2186391 - 2187986 | 55215.8 |
| mtrab system histidine kinase mtrb | A6122_RS09905 | Not Available | Negative | 2188094 - 2189752 | 60099.6 |
| mtrab system response regulator mtra | A6122_RS09910 | Not Available | Negative | 2189755 - 2190441 | 24735.0 |
| hypothetical protein | A6122_RS09915 | Not Available | Positive | 2190859 - 2191860 | 34697.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
