Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsk/spoiiie domain-containing protein | A6122_RS09830 | Not Available | Positive | 2161047 - 2165267 | 148621.0 |
| hypothetical protein | A6122_RS16570 | Not Available | Negative | 2165395 - 2165568 | 6528.71 |
| transposase family protein | A6122_RS15810 | Not Available | Negative | 2166438 - 2166908 | 17525.8 |
| is256 family transposase | A6122_RS09835 | Not Available | Negative | 2166976 - 2168337 | 50192.2 |
| transposase family protein | A6122_RS09840 | Not Available | Negative | 2168346 - 2168669 | 11870.6 |
| duf6531 domain-containing protein | A6122_RS09845 | Not Available | Negative | 2169087 - 2174492 | 192168.0 |
| pyrophosphorylase | A6122_RS09850 | Not Available | Negative | 2174576 - 2174857 | 10005.6 |
| serine/threonine-protein kinase | A6122_RS09855 | Not Available | Negative | 2175010 - 2176935 | 65908.1 |
| aldo/keto reductase | A6122_RS09860 | Not Available | Negative | 2177036 - 2178013 | 36132.4 |
| hypothetical protein | A6122_RS09865 | Not Available | Negative | 2178089 - 2178454 | 12458.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
