Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium/cobalt transporter cora | A6122_RS09780 | Not Available | Negative | 2146279 - 2147301 | 38429.8 |
| guab1 family imp dehydrogenase-related protein | A6122_RS09785 | Not Available | Negative | 2147330 - 2148769 | 49666.2 |
| multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit | A6122_RS09790 | Not Available | Positive | 2148973 - 2152728 | 137580.0 |
| zf-hc2 domain-containing protein | A6122_RS09795 | Not Available | Negative | 2152824 - 2153087 | 9425.14 |
| sigma-70 family rna polymerase sigma factor | A6122_RS09800 | Not Available | Negative | 2153084 - 2153785 | 26202.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | A6122_RS09805 | Not Available | Positive | 2153939 - 2155294 | 46524.4 |
| ribosome small subunit-dependent gtpase a | A6122_RS09810 | Not Available | Positive | 2155298 - 2156374 | 38648.4 |
| thioredoxin-dependent thiol peroxidase | A6122_RS09815 | Not Available | Positive | 2156371 - 2156865 | 17975.3 |
| hypothetical protein | A6122_RS09820 | Not Available | Positive | 2156990 - 2159737 | 91629.8 |
| hypothetical protein | A6122_RS09825 | Not Available | Positive | 2159734 - 2161038 | 42020.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
