Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | A6122_RS09680 | Not Available | Negative | 2125000 - 2125686 | 24127.1 |
| peptidase s51 | A6122_RS09685 | Not Available | Negative | 2125691 - 2126416 | 24140.8 |
| phosphoribosyltransferase | A6122_RS09690 | Not Available | Negative | 2126413 - 2126943 | 18843.7 |
| sdr family oxidoreductase | A6122_RS09695 | Not Available | Negative | 2126986 - 2127762 | 27004.5 |
| acyltransferase family protein | A6122_RS09700 | Not Available | Positive | 2127833 - 2128981 | 42835.9 |
| bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase | A6122_RS09705 | Not Available | Positive | 2129094 - 2130422 | 47571.9 |
| homoserine o-acetyltransferase | A6122_RS09710 | Not Available | Positive | 2130533 - 2131762 | 43679.3 |
| sensor histidine kinase | A6122_RS09715 | Not Available | Positive | 2131870 - 2133027 | 40063.8 |
| hypothetical protein | A6122_RS09720 | Not Available | Positive | 2133024 - 2134268 | 43514.9 |
| response regulator | A6122_RS09725 | Not Available | Positive | 2134321 - 2134980 | 23643.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
