Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine protease | A6122_RS09635 | Not Available | Negative | 2117874 - 2118875 | 35401.3 |
| atp-dependent dna ligase | A6122_RS09640 | Not Available | Negative | 2119243 - 2119551 | 11514.9 |
| hypothetical protein | A6122_RS16560 | Not Available | Negative | 2119554 - 2120216 | 23527.3 |
| hypothetical protein | A6122_RS09650 | Not Available | Positive | 2120528 - 2120791 | 9874.67 |
| gaf and antar domain-containing protein | A6122_RS09655 | Not Available | Positive | 2120860 - 2121489 | 21965.9 |
| gaf and antar domain-containing protein | A6122_RS09660 | Not Available | Positive | 2121503 - 2122216 | 25735.4 |
| hypothetical protein | A6122_RS16565 | Not Available | Negative | 2122344 - 2122640 | 10481.6 |
| m48 family metalloprotease | A6122_RS09665 | Not Available | Negative | 2122826 - 2123707 | 31204.3 |
| lema family protein | A6122_RS09670 | Not Available | Negative | 2123717 - 2124283 | 21134.3 |
| gnat family n-acetyltransferase | A6122_RS09675 | Not Available | Negative | 2124355 - 2124933 | 21950.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
