Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mycothiol conjugate amidase mca | A6122_RS09585 | Not Available | Negative | 2107385 - 2108413 | 36547.9 |
| duf4307 domain-containing protein | A6122_RS09590 | Not Available | Positive | 2108527 - 2108991 | 16621.5 |
| transcription elongation factor grea | A6122_RS09595 | Not Available | Positive | 2109135 - 2109626 | 17816.7 |
| threonine ammonia-lyase | A6122_RS09600 | Not Available | Negative | 2109948 - 2111189 | 43030.2 |
| ai-2e family transporter | A6122_RS09605 | Not Available | Negative | 2111179 - 2112369 | 41475.6 |
| abc transporter atp-binding protein | A6122_RS09610 | Not Available | Negative | 2112422 - 2113507 | 38442.3 |
| abc transporter permease | A6122_RS16550 | Not Available | Negative | 2113504 - 2114319 | 28315.8 |
| abc transporter permease subunit | A6122_RS16555 | Not Available | Negative | 2114307 - 2115200 | 30698.3 |
| abc transporter substrate-binding protein | A6122_RS09625 | Not Available | Negative | 2115197 - 2116333 | 38323.1 |
| winged helix-turn-helix domain-containing protein | A6122_RS09630 | Not Available | Positive | 2116500 - 2117714 | 45790.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
