Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell wall-binding repeat-containing protein | A6122_RS09485 | Not Available | Negative | 2087797 - 2089983 | 74497.9 |
| dna recombination protein rmuc | A6122_RS09490 | Not Available | Positive | 2090057 - 2091391 | 47737.6 |
| class ii fructose-bisphosphatase | A6122_RS09495 | Not Available | Negative | 2091357 - 2092289 | 32708.2 |
| class ii fructose-bisphosphate aldolase | A6122_RS09500 | Not Available | Positive | 2092542 - 2093567 | 36468.8 |
| duf6264 family protein | A6122_RS09505 | Not Available | Positive | 2093579 - 2094145 | 19723.9 |
| helix-turn-helix domain-containing protein | A6122_RS09510 | Not Available | Positive | 2094368 - 2094664 | 10575.0 |
| hypothetical protein | A6122_RS09515 | Not Available | Positive | 2094952 - 2095203 | 8683.11 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | A6122_RS09520 | Not Available | Negative | 2095200 - 2096246 | 37374.4 |
| exodeoxyribonuclease vii large subunit | A6122_RS09525 | Not Available | Positive | 2096392 - 2097624 | 44466.2 |
| exodeoxyribonuclease vii small subunit | A6122_RS09530 | Not Available | Positive | 2097676 - 2097915 | 8404.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
