Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS16525 | Not Available | Positive | 2069378 - 2069518 | 5252.2 |
| hypothetical protein | A6122_RS09420 | Not Available | Negative | 2069524 - 2070732 | 44332.8 |
| ycao-like family protein | A6122_RS09425 | Not Available | Negative | 2070761 - 2072560 | 63923.0 |
| hypothetical protein | A6122_RS09430 | Not Available | Negative | 2072575 - 2073477 | 32866.0 |
| transposase family protein | A6122_RS15790 | Not Available | Negative | 2073580 - 2074350 | 28629.6 |
| hypothetical protein | A6122_RS16530 | Not Available | Negative | 2074308 - 2075096 | 28754.7 |
| lantibiotic dehydratase | A6122_RS09440 | Not Available | Negative | 2075105 - 2077288 | 79583.3 |
| hypothetical protein | A6122_RS16535 | Not Available | Negative | 2077565 - 2077855 | 10816.0 |
| isl3 family transposase | A6122_RS09445 | Not Available | Positive | 2078023 - 2079333 | 48672.6 |
| hypothetical protein | A6122_RS16540 | Not Available | Negative | 2079325 - 2079900 | 21196.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
