Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | A6122_RS09320 | Not Available | Negative | 2042569 - 2044188 | 57251.3 |
| cpbp family intramembrane glutamic endopeptidase | A6122_RS09325 | Not Available | Positive | 2044517 - 2045260 | 26656.9 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | A6122_RS09330 | Not Available | Negative | 2045290 - 2046174 | 31291.2 |
| aminomethyl-transferring glycine dehydrogenase | A6122_RS09335 | Not Available | Negative | 2046383 - 2049289 | 102685.0 |
| glycine cleavage system protein gcvh | A6122_RS09340 | Not Available | Negative | 2049290 - 2049664 | 13101.2 |
| glycine cleavage system aminomethyltransferase gcvt | A6122_RS09345 | Not Available | Negative | 2049666 - 2050844 | 41593.4 |
| nrtr dna-binding winged helix domain-containing protein | A6122_RS09350 | Not Available | Positive | 2051251 - 2051928 | 25179.0 |
| quinolinate synthase nada | A6122_RS09355 | Not Available | Positive | 2051978 - 2053267 | 45802.5 |
| l-aspartate oxidase | A6122_RS09360 | Not Available | Positive | 2053269 - 2054756 | 50211.0 |
| carboxylating nicotinate-nucleotide diphosphorylase | A6122_RS09365 | Not Available | Positive | 2054750 - 2055601 | 29466.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
