Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | A6122_RS09270 | Not Available | Negative | 2030378 - 2030698 | 11710.7 |
| pig-l family deacetylase | A6122_RS09275 | Not Available | Negative | 2030728 - 2031900 | 40032.6 |
| iron uptake transporter permease efeu | A6122_RS09280 | Not Available | Positive | 2032110 - 2032976 | 29946.0 |
| iron uptake system protein efeo | A6122_RS09285 | Not Available | Positive | 2033045 - 2034298 | 43649.3 |
| iron uptake transporter deferrochelatase/peroxidase subunit | A6122_RS09290 | Not Available | Positive | 2034352 - 2035629 | 44419.0 |
| thioredoxin domain-containing protein | A6122_RS09295 | Not Available | Positive | 2035765 - 2036673 | 31589.9 |
| translational gtpase typa | A6122_RS09300 | Not Available | Negative | 2036765 - 2038669 | 69164.5 |
| abc transporter atp-binding protein | A6122_RS09305 | Not Available | Negative | 2038821 - 2040557 | 61565.3 |
| abc transporter permease | A6122_RS09310 | Not Available | Negative | 2040554 - 2041522 | 34412.2 |
| abc transporter permease | A6122_RS09315 | Not Available | Negative | 2041512 - 2042441 | 33765.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
