Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1003 domain-containing protein | A6122_RS09225 | Not Available | Positive | 2020651 - 2021175 | 20113.1 |
| p-loop ntpase | A6122_RS09230 | Not Available | Positive | 2021168 - 2022313 | 38847.3 |
| twin-arginine translocase tata/tate family subunit | A6122_RS15780 | Not Available | Negative | 2022347 - 2022763 | 15025.0 |
| o-methyltransferase | A6122_RS09240 | Not Available | Positive | 2022872 - 2023504 | 22317.7 |
| duf3117 domain-containing protein | A6122_RS15785 | Not Available | Negative | 2023633 - 2023806 | 5940.23 |
| hypothetical protein | A6122_RS09245 | Not Available | Negative | 2023894 - 2025108 | 43929.4 |
| succinyl-diaminopimelate desuccinylase | A6122_RS09250 | Not Available | Negative | 2025105 - 2026202 | 39083.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | A6122_RS09255 | Not Available | Positive | 2026248 - 2027243 | 34694.4 |
| citrate synthase | A6122_RS09260 | Not Available | Negative | 2027665 - 2029050 | 51118.6 |
| succinyldiaminopimelate transaminase | A6122_RS09265 | Not Available | Negative | 2029258 - 2030367 | 39402.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
