Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | A6122_RS00875 | Not Available | Positive | 200723 - 201253 | 19190.2 |
| alpha/beta fold hydrolase | A6122_RS00880 | Not Available | Negative | 201254 - 202069 | 29211.8 |
| aipr family protein | A6122_RS00885 | Not Available | Positive | 202898 - 204169 | 46545.1 |
| hypothetical protein | A6122_RS00890 | Not Available | Positive | 204166 - 204681 | 19057.7 |
| dna cytosine methyltransferase | A6122_RS00895 | Not Available | Positive | 205197 - 206156 | 34480.2 |
| ngomiv family type ii restriction endonuclease | A6122_RS00900 | Not Available | Positive | 206156 - 207034 | 31718.8 |
| duf4012 domain-containing protein | A6122_RS00905 | Not Available | Positive | 208124 - 209947 | 63240.8 |
| duf6264 family protein | A6122_RS00910 | Not Available | Negative | 209966 - 210475 | 17913.1 |
| exodeoxyribonuclease iii | A6122_RS00915 | Not Available | Negative | 210478 - 211317 | 30617.1 |
| abc transporter atp-binding protein | A6122_RS00920 | Not Available | Positive | 211480 - 213213 | 62527.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
