Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS09175 | Not Available | Positive | 2010698 - 2011225 | 18217.3 |
| transglutaminase family protein | A6122_RS09180 | Not Available | Negative | 2011281 - 2012075 | 28286.4 |
| Trna-arg | Not Available | Not Available | Positive | 2012158 - 2012229 | Not Available |
| bsubi/psti family type ii restriction endonuclease | A6122_RS09190 | Not Available | Negative | 2012742 - 2013680 | 34615.3 |
| eco57i restriction-modification methylase domain-containing protein | A6122_RS09195 | Not Available | Negative | 2013677 - 2015107 | 52561.7 |
| hypothetical protein | A6122_RS09200 | Not Available | Negative | 2015640 - 2015864 | 7793.28 |
| response regulator transcription factor | A6122_RS09205 | Not Available | Positive | 2016477 - 2017151 | 24425.6 |
| cell wall metabolism sensor histidine kinase walk | A6122_RS09210 | Not Available | Positive | 2017164 - 2018564 | 49425.4 |
| general stress protein | A6122_RS09215 | Not Available | Negative | 2018624 - 2019199 | 20417.5 |
| magnesium transporter mgte n-terminal domain-containing protein | A6122_RS09220 | Not Available | Positive | 2019315 - 2020658 | 48488.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
