Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 5 protein | A6122_RS09125 | Not Available | Negative | 1997211 - 1998392 | 41986.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | A6122_RS09130 | Not Available | Negative | 1998532 - 1999407 | 30765.9 |
| peptide chain release factor 1 | A6122_RS09135 | Not Available | Negative | 1999404 - 2000486 | 39883.7 |
| transcription termination factor rho | A6122_RS09140 | Not Available | Negative | 2000595 - 2002931 | 83093.7 |
| homoserine kinase | A6122_RS09145 | Not Available | Negative | 2003166 - 2004134 | 33600.3 |
| threonine synthase | A6122_RS09150 | Not Available | Negative | 2004131 - 2005207 | 37328.4 |
| homoserine dehydrogenase | A6122_RS09155 | Not Available | Negative | 2005209 - 2006552 | 46046.9 |
| diaminopimelate decarboxylase | A6122_RS09160 | Not Available | Negative | 2006549 - 2007982 | 50497.7 |
| lmea family phospholipid-binding protein | A6122_RS09165 | Not Available | Negative | 2008177 - 2008950 | 25932.1 |
| arginine--trna ligase | A6122_RS09170 | Not Available | Negative | 2008947 - 2010605 | 59731.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
