Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase rfba | A6122_RS09075 | Not Available | Positive | 1984729 - 1985613 | 32273.7 |
| dtdp-glucose 4,6-dehydratase | A6122_RS09080 | Not Available | Positive | 1985653 - 1986645 | 36670.7 |
| wecb/taga/cpsf family glycosyltransferase | A6122_RS09085 | Not Available | Negative | 1986652 - 1987473 | 30000.0 |
| glycosyltransferase family 4 protein | A6122_RS09090 | Not Available | Negative | 1987470 - 1988696 | 44563.0 |
| glycosyltransferase | A6122_RS09095 | Not Available | Positive | 1988905 - 1989945 | 38175.3 |
| hypothetical protein | A6122_RS09100 | Not Available | Positive | 1989942 - 1990997 | 38460.9 |
| lipopolysaccharide biosynthesis protein | A6122_RS09105 | Not Available | Negative | 1991037 - 1992482 | 50813.6 |
| polysaccharide pyruvyl transferase family protein | A6122_RS09110 | Not Available | Negative | 1992479 - 1993333 | 31098.2 |
| o-antigen ligase | A6122_RS09115 | Not Available | Positive | 1993615 - 1994877 | 44760.6 |
| hypothetical protein | A6122_RS09120 | Not Available | Negative | 1994905 - 1997082 | 75236.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
