Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potd/potf family extracellular solute-binding protein | A6122_RS08925 | Not Available | Negative | 1952586 - 1953812 | 44725.3 |
| hypothetical protein | A6122_RS08930 | Not Available | Negative | 1953998 - 1954591 | 20596.6 |
| pp2c family serine/threonine-protein phosphatase | A6122_RS08935 | Not Available | Negative | 1954697 - 1955521 | 28243.1 |
| lrp/asnc family transcriptional regulator | A6122_RS08940 | Not Available | Positive | 1955806 - 1956285 | 17580.2 |
| aspartate aminotransferase family protein | A6122_RS08945 | Not Available | Positive | 1956289 - 1957734 | 52786.5 |
| hypothetical protein | A6122_RS08950 | Not Available | Negative | 1957740 - 1958609 | 29886.4 |
| methylated-dna--[protein]-cysteine s-methyltransferase | A6122_RS08955 | Not Available | Positive | 1958841 - 1959335 | 17533.2 |
| dna-3-methyladenine glycosylase i | A6122_RS08960 | Not Available | Positive | 1959332 - 1959925 | 21968.9 |
| yaaa family protein | A6122_RS08965 | Not Available | Negative | 1959929 - 1960681 | 27012.2 |
| f0f1 atp synthase subunit epsilon | A6122_RS08970 | Not Available | Negative | 1960784 - 1961047 | 8975.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
