Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | A6122_RS08875 | Not Available | Negative | 1942208 - 1943290 | 38213.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | A6122_RS08880 | Not Available | Negative | 1943328 - 1944293 | 31892.2 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | A6122_RS08885 | Not Available | Positive | 1944416 - 1945750 | 47244.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | A6122_RS08890 | Not Available | Positive | 1945794 - 1946549 | 27057.4 |
| osmc family protein | A6122_RS08895 | Not Available | Negative | 1946553 - 1947020 | 16754.7 |
| 4-aminobutyrate--2-oxoglutarate transaminase | A6122_RS08900 | Not Available | Positive | 1947111 - 1948472 | 47015.3 |
| asparaginase | A6122_RS08905 | Not Available | Positive | 1948575 - 1949570 | 34279.4 |
| abc transporter permease | A6122_RS08910 | Not Available | Negative | 1949592 - 1950398 | 28819.7 |
| abc transporter permease | A6122_RS08915 | Not Available | Negative | 1950464 - 1951381 | 33047.8 |
| abc transporter atp-binding protein | A6122_RS08920 | Not Available | Negative | 1951384 - 1952586 | 42726.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
