Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS08830 | Not Available | Positive | 1930146 - 1930367 | 7504.89 |
| 30s ribosome-binding factor rbfa | A6122_RS08835 | Not Available | Negative | 1930364 - 1930801 | 15912.7 |
| translation initiation factor if-2 | A6122_RS08840 | Not Available | Negative | 1931103 - 1933988 | 99331.6 |
| ylxr family protein | A6122_RS15770 | Not Available | Negative | 1934087 - 1934410 | 11785.0 |
| transcription termination factor nusa | A6122_RS08845 | Not Available | Negative | 1934462 - 1935463 | 36012.0 |
| duf2599 domain-containing protein | A6122_RS15775 | Not Available | Negative | 1935709 - 1936698 | 33748.7 |
| proline--trna ligase | A6122_RS08855 | Not Available | Negative | 1936784 - 1938550 | 63927.8 |
| hypothetical protein | A6122_RS08860 | Not Available | Negative | 1938604 - 1939086 | 16201.4 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | A6122_RS08865 | Not Available | Negative | 1939108 - 1940268 | 40593.0 |
| rip metalloprotease | A6122_RS08870 | Not Available | Negative | 1940669 - 1942045 | 47814.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
