Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetyl-adp-ribose deacetylase | A6122_RS08780 | Not Available | Positive | 1921675 - 1922196 | 17645.9 |
| gdsl-type esterase/lipase family protein | A6122_RS08785 | Not Available | Negative | 1922242 - 1922865 | 22922.2 |
| sdr family oxidoreductase | A6122_RS08790 | Not Available | Negative | 1922922 - 1924469 | 56052.2 |
| bifunctional riboflavin kinase/fad synthetase | A6122_RS08795 | Not Available | Negative | 1924531 - 1925496 | 34739.6 |
| hypothetical protein | A6122_RS08800 | Not Available | Negative | 1925496 - 1926014 | 18058.1 |
| hypothetical protein | A6122_RS08805 | Not Available | Negative | 1926065 - 1926433 | 13333.9 |
| trna pseudouridine(55) synthase trub | A6122_RS08810 | Not Available | Negative | 1926430 - 1927377 | 32726.2 |
| ketopantoate reductase family protein | A6122_RS08815 | Not Available | Positive | 1927461 - 1928459 | 34526.7 |
| hypothetical protein | A6122_RS08820 | Not Available | Negative | 1928506 - 1929105 | 22283.3 |
| a/g-specific adenine glycosylase | A6122_RS08825 | Not Available | Positive | 1929142 - 1930023 | 31281.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
