Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | A6122_RS00825 | Not Available | Negative | 189501 - 190313 | 28119.1 |
| nitroreductase family protein | A6122_RS00830 | Not Available | Negative | 190455 - 191042 | 20949.5 |
| dihydrolipoyl dehydrogenase | A6122_RS00835 | Not Available | Positive | 191259 - 192659 | 50053.1 |
| gnat family n-acetyltransferase | A6122_RS00840 | Not Available | Positive | 192878 - 193669 | 28131.6 |
| hypothetical protein | A6122_RS00845 | Not Available | Negative | 193716 - 194732 | 33292.5 |
| low specificity l-threonine aldolase | A6122_RS00850 | Not Available | Negative | 194729 - 195811 | 38162.0 |
| hypothetical protein | A6122_RS00855 | Not Available | Positive | 196007 - 196675 | 24845.0 |
| response regulator transcription factor | A6122_RS00860 | Not Available | Negative | 196799 - 197476 | 24538.6 |
| sensor histidine kinase | A6122_RS00865 | Not Available | Negative | 197473 - 198864 | 48685.0 |
| duf6421 family protein | A6122_RS00870 | Not Available | Negative | 198947 - 200350 | 52507.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
