Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | A6122_RS08635 | Not Available | Negative | 1888102 - 1888698 | 22340.5 |
| 3-isopropylmalate dehydratase large subunit | A6122_RS08640 | Not Available | Negative | 1888701 - 1890191 | 52531.5 |
| pp2c family serine/threonine-protein phosphatase | A6122_RS08645 | Not Available | Negative | 1890370 - 1891140 | 26670.3 |
| terc family protein | A6122_RS08650 | Not Available | Negative | 1891148 - 1892188 | 38540.8 |
| Trna-glu | Not Available | Not Available | Positive | 1892448 - 1892523 | Not Available |
| mbl fold metallo-hydrolase | A6122_RS08660 | Not Available | Positive | 1892649 - 1893287 | 22754.0 |
| hypothetical protein | A6122_RS08665 | Not Available | Negative | 1893307 - 1893795 | 16542.8 |
| l-threonylcarbamoyladenylate synthase | A6122_RS08670 | Not Available | Negative | 1893925 - 1894704 | 28694.9 |
| hypothetical protein | A6122_RS08675 | Not Available | Negative | 1894852 - 1896024 | 39660.9 |
| l-threonylcarbamoyladenylate synthase | A6122_RS08680 | Not Available | Negative | 1896044 - 1896685 | 22494.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
