Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3515 family protein | A6122_RS08585 | Not Available | Negative | 1878631 - 1879209 | 19727.4 |
| d-alanine--d-alanine ligase family protein | A6122_RS08590 | Not Available | Negative | 1879400 - 1880506 | 38762.2 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | A6122_RS08595 | Not Available | Negative | 1880403 - 1881518 | 39236.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | A6122_RS08600 | Not Available | Negative | 1881535 - 1882278 | 27266.9 |
| glutamate-cysteine ligase family protein | A6122_RS16510 | Not Available | Negative | 1882401 - 1883317 | 33302.7 |
| glutamate-cysteine ligase family protein | A6122_RS08610 | Not Available | Negative | 1883349 - 1883645 | 11466.9 |
| is256 family transposase | A6122_RS08615 | Not Available | Positive | 1883695 - 1885056 | 50192.2 |
| glutamate-cysteine ligase family protein | A6122_RS08620 | Not Available | Negative | 1885098 - 1886171 | 39154.8 |
| glutamate-cysteine ligase family protein | A6122_RS17300 | Not Available | Negative | 1886216 - 1886581 | 13027.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | A6122_RS08630 | Not Available | Negative | 1886730 - 1888100 | 48696.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
