Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iv | A6122_RS08535 | Not Available | Positive | 1867148 - 1867981 | 28807.4 |
| 2-phospho-l-lactate guanylyltransferase | A6122_RS08540 | Not Available | Negative | 1867992 - 1868603 | 20216.4 |
| coenzyme f420-0:l-glutamate ligase | A6122_RS08545 | Not Available | Negative | 1868600 - 1869391 | 26805.0 |
| pantetheine-phosphate adenylyltransferase | A6122_RS08550 | Not Available | Negative | 1869461 - 1869943 | 16910.7 |
| atp-dependent dna helicase recg | A6122_RS08555 | Not Available | Negative | 1869971 - 1872136 | 77173.7 |
| duf3488 and transglutaminase-like domain-containing protein | A6122_RS08560 | Not Available | Negative | 1872147 - 1874375 | 76509.1 |
| duf58 domain-containing protein | A6122_RS08565 | Not Available | Negative | 1874372 - 1875667 | 45855.2 |
| moxr family atpase | A6122_RS08570 | Not Available | Negative | 1875657 - 1876688 | 36867.3 |
| rsmd family rna methyltransferase | A6122_RS08575 | Not Available | Positive | 1876807 - 1877415 | 21143.8 |
| thiamine-phosphate kinase | A6122_RS08580 | Not Available | Negative | 1877422 - 1878456 | 34634.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
