Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS16505 | Not Available | Positive | 1856507 - 1857565 | 38413.6 |
| enoyl-acp reductase fabi | A6122_RS08485 | Not Available | Positive | 1857562 - 1858329 | 26975.1 |
| hypothetical protein | A6122_RS17290 | Not Available | Negative | 1858632 - 1859165 | 18025.7 |
| hypothetical protein | A6122_RS17295 | Not Available | Negative | 1859219 - 1859434 | 7836.45 |
| tetr/acrr family transcriptional regulator | A6122_RS08505 | Not Available | Negative | 1859503 - 1860162 | 24340.8 |
| sos response-associated peptidase | A6122_RS08510 | Not Available | Positive | 1860303 - 1861007 | 24805.4 |
| app1 family protein | A6122_RS08515 | Not Available | Positive | 1861114 - 1862169 | 38531.9 |
| ycei family protein | A6122_RS08520 | Not Available | Negative | 1862246 - 1862800 | 19961.3 |
| mfs transporter | A6122_RS08525 | Not Available | Negative | 1863080 - 1864453 | 45903.0 |
| transglycosylase domain-containing protein | A6122_RS08530 | Not Available | Positive | 1864582 - 1867044 | 85673.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
