Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbosone dehydrogenase family protein | A6122_RS17280 | Not Available | Positive | 1847540 - 1848433 | 29915.3 |
| pkd domain-containing protein | A6122_RS17285 | Not Available | Positive | 1848719 - 1849792 | 35814.4 |
| deda family protein | A6122_RS08435 | Not Available | Positive | 1849919 - 1850557 | 22932.6 |
| abc transporter substrate-binding protein | A6122_RS08440 | Not Available | Negative | 1850587 - 1851516 | 32029.0 |
| abc transporter permease | A6122_RS08445 | Not Available | Negative | 1851519 - 1852271 | 25623.2 |
| abc transporter permease | A6122_RS08450 | Not Available | Negative | 1852268 - 1852954 | 24282.4 |
| abc transporter atp-binding protein | A6122_RS08455 | Not Available | Negative | 1852951 - 1853781 | 29899.0 |
| tetr/acrr family transcriptional regulator | A6122_RS08460 | Not Available | Negative | 1854031 - 1854486 | 16068.4 |
| hypothetical protein | A6122_RS08470 | Not Available | Positive | 1855126 - 1855449 | 12122.6 |
| sdr family nad(p)-dependent oxidoreductase | A6122_RS08475 | Not Available | Negative | 1855446 - 1856261 | 28956.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
